Article information

2016 , Volume 21, Special issue, p.75-81

Molorodov Y.I., Chernenko V.V.

Use of Leaflet library for visualization and analysis of contamination for areas infected by tick-borne diseases

Purpose. The paper describes the architecture and function features for an information system which is working with empirical data of field observations aimed at resettlement, migration tick species Ixodes persulcatus, Ixodes pavlovskyi and Dermacentor reticulatus and infectious agents transmitted by them. The information system has user-friendly interface, which is based on interactive geographic maps with visualization of the position of field work, in the form of tokens. Factual material for the research uses data field expeditions carried out in Altai region, the Western and Eastern Siberia and Kazakhstan since 2004 to the present time. Methodology. To solve this problem, we used advanced GIS technology based on non-commercial Web mapping project OpenStreetMap and Leaflet library. Statistical analysis was performed using Google Charts library algorithms. Findings. Based on factual material for the tick gathering field expeditions in North Asia, and the results of genome-sequencing, IT architecture was developed and a pilot version of interactive information system (IS,) was created that is intended for organization of collection, storage and processing of the field work, resettlement and ticks migration as well as pathogens they carry. Navigation map was implemented by standard graphical Web-based interface, that select the area of works and visualization of statistical material, which shows the type of insects and pathogens carried by them. Conclusion. An information resource allowing experts to evaluate the molecular genetic diversity of bacteria-carriers of tick-borne encephalitis, borreliosis, ehrlichiosis and other bacteria carriers circulating on the territory of Siberia was created.

[full text]
Keywords: Locus, pathogen, tick, infectious agents, infected-areas, sequencing, Rickettsia, Borrelia encephalitis

Author(s):
Molorodov Yuriy Ivanovich
PhD. , Senior Scientist
Position: Senior Research Scientist
Office: Inctitute of Computational Technologies SB RAS
Address: 630090, Russia, Novosibirsk, Ac. Lavrentiev ave., 6
Phone Office: (383) 334-91-22
E-mail: yumo@ict.sbras.ru
SPIN-code: 1941-0259

Chernenko Vladislav Valeryevich
Position: Student
Office: Novosibirsk State University
Address: 630090, Russia, Novosibirsk, 2, Pirogova str.
Phone Office: (383)334-91-22
E-mail: vlavlad.chernenko@gmail.com

References:
[1] RUZHNIKOV, G. M. , DANCHINOVA, G. A. , FEDOROV, R. K., KHASNATINOV, M. A., PARAMONOV, V. V., LYAPUNOV, A. V. Modern technologies for informational and analytical evaluation of activity and forecast of spatial distribution of Ixodid ticks by the example of Irkutsk city. The Siberian Scientific Medical Journal. 2012; 32(6):Ñ. 55–59. (In Russ.)
[2] Livanova, N.N., Borgoyakov, V.Y., Livanov, S.G., Tikunova, N.V., Fomenko, N.V. Characteristic of natural foci of tick-borne borreliosis in Novosibirsk scientific center and Novosibirsk regionCharacteristics of natural foci of tick borreliosis. Novosibirsk Scientific Center and the Novosibirsk Region. The Siberian Scientific Medical Journal. 2012; 111(4):20–23. (In Russ.)
[3] Maltsev, V.Y., Molorodov, Y.I., Skachkov, D.M. Data mining technology for in-formation on the natural habitat of bacterial pathogen species for transferability-pendent ticks. XV Rossiyskaya konferentsiya s mezhdunarodnym uchastiem “Raspredelennye informatsionno - vychislitel'nye resursy”, 2 - 5 dekabrya 2014, Novosibirsk. Available at: http: //konf.ict.nsc. ru / dicr2014 / reportview / 249374. (In Russ.)
[4] Tkachev S.E., Panov V., Gerhard D., Tikunova N.V. First detection of Kemerovo virus in Ixodes pavlovskyi and Ixodes persulcatus ticks collected in Novosibirsk region, Russia Ticks and Tick-borne Diseases. Ticks Tick-borne Dis. 2014; 5(5):494-496.
[5] Rar V.A., Epikhina T.I., Yakimenko V.V., Malkova M.G., Tancev A.K., Bondarenko E.I., Ivanov M.K., Tikunova N.V. Genetic variability of Anaplasma phagocytophilum in ticks and voles from Ixodes persulcatus/Ixodes trianguliceps sympatric areas from Western Siberia, Russia. Ticks Tick-borne Dis. 2014; 5(6):854-863.



Bibliography link:
Molorodov Y.I., Chernenko V.V. Use of Leaflet library for visualization and analysis of contamination for areas infected by tick-borne diseases // Computational technologies. 2016. V. 21. Special issue: Information technologies, systems and equipment in agroindustrial complex. P. 75-81
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