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Article information
2000 , Volume 5, Special issue, p.41-47
Levitsky V.G., Katokhin A.V., Kolchanov N.A.
Inherent modular promoter structure and its application for recognition tools development
New algorithm for eukaryotic promoter recognition based on the special dissection of promoter region into nonoverlapping parts is presented. The recognition function is derived by discriminant analysis of dinucleotides frequencies for each dissected part. The approach suggested was applied to Drosophila melanogaster data set. The recognition performance achieved is comparable with the best results produced by the algorithms proposed earlier.
Author(s):
Levitsky V.G.
Office: Institute of Cytology and Genetics SB RAS
Address: Russia, Novosibirsk
E-mail: levitsky@bionet.nsc.ru
Katokhin A.V.
Office: Institute of Cytology and Genetics SB RAS
Address: Russia, Novosibirsk
E-mail: oleg@bionet.nsc.ru
Kolchanov N.A.
Office: Institute of Cytology and Genetics SB RAS
Address: Russia, Novosibirsk
Bibliography link:
Levitsky V.G., Katokhin A.V., Kolchanov N.A. Inherent modular promoter structure and its application for recognition tools development // Computational technologies. 2000. V. 5. The special issue is devoted to the 10-th anniversary of the Laboratory of Theoretical Genetics of the Institute of Cytology and Genetics SB RAS. P. 41-47
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